Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 AL031719.1-201ENST00000623365 2587 ntBASIC12.69□□□□□ -0.38
RFT1Q96AA3 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 MIR661-201ENST00000384842 89 ntBASIC12.69□□□□□ -0.38
RFT1Q96AA3 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.69□□□□□ -0.38
RFT1Q96AA3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 API5-211ENST00000534695 560 ntTSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 AC131206.1-201ENST00000538078 1211 ntBASIC12.69□□□□□ -0.38
RFT1Q96AA3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 LINC02560-201ENST00000596379 459 ntBASIC12.69□□□□□ -0.38
RFT1Q96AA3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 AJ011932.1-201ENST00000621707 465 ntBASIC12.69□□□□□ -0.38
RFT1Q96AA3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 TNRC18P1-201ENST00000502875 3650 ntBASIC12.69□□□□□ -0.38
RFT1Q96AA3 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
RFT1Q96AA3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.69□□□□□ -0.38
RFT1Q96AA3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 RN7SKP230-201ENST00000365642 335 ntBASIC12.68□□□□□ -0.38
RFT1Q96AA3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.68□□□□□ -0.38
RFT1Q96AA3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
RFT1Q96AA3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms