Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HPS1Q92902 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.23□□□□□ -0.29
HPS1Q92902 AC074338.1-201ENST00000416825 156 ntBASIC13.23□□□□□ -0.29
HPS1Q92902 AC112492.5-201ENST00000421897 457 ntBASIC13.23□□□□□ -0.29
HPS1Q92902 VN1R53P-201ENST00000429536 957 ntBASIC13.23□□□□□ -0.29
HPS1Q92902 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.23□□□□□ -0.29
HPS1Q92902 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 WFDC1-204ENST00000613603 549 ntBASIC13.23□□□□□ -0.29
HPS1Q92902 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HPS1Q92902 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 AC145098.2-201ENST00000623593 3026 ntBASIC13.23□□□□□ -0.29
HPS1Q92902 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HPS1Q92902 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HPS1Q92902 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.22□□□□□ -0.29
HPS1Q92902 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HPS1Q92902 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HPS1Q92902 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 AL442647.2-201ENST00000429864 857 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 KRT43P-201ENST00000434019 910 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC13.22□□□□□ -0.29
HPS1Q92902 AC007041.1-201ENST00000438989 1155 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 AC234783.1-201ENST00000441761 496 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.22□□□□□ -0.29
HPS1Q92902 RN7SL399P-201ENST00000471648 279 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 RPL13AP25-201ENST00000484130 612 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 AC015910.1-201ENST00000579400 975 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 RPAP2P1-201ENST00000603626 1168 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 AC090953.1-201ENST00000604305 1092 ntBASIC13.22□□□□□ -0.29
HPS1Q92902 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
HPS1Q92902 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.22□□□□□ -0.29
HPS1Q92902 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.22□□□□□ -0.29
HPS1Q92902 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.22□□□□□ -0.29
HPS1Q92902 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HPS1Q92902 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms