Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SNED1Q8TER0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 AL050341.2-201ENST00000567508 1541 ntBASIC16.86■□□□□ 0.29
SNED1Q8TER0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 TUBB8P4-201ENST00000511806 1324 ntBASIC16.86■□□□□ 0.29
SNED1Q8TER0 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 AL121949.3-201ENST00000406684 385 ntBASIC16.86■□□□□ 0.29
SNED1Q8TER0 RPL14-203ENST00000416518 812 ntTSL 3 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 AC108724.1-201ENST00000481669 352 ntBASIC16.86■□□□□ 0.29
SNED1Q8TER0 AC092910.2-201ENST00000491262 348 ntBASIC16.86■□□□□ 0.29
SNED1Q8TER0 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.86■□□□□ 0.29
SNED1Q8TER0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNED1Q8TER0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 LILRP2-202ENST00000413572 1383 ntBASIC16.85■□□□□ 0.29
SNED1Q8TER0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 AC123912.6-201ENST00000612657 315 ntBASIC16.85■□□□□ 0.29
SNED1Q8TER0 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.85■□□□□ 0.29
SNED1Q8TER0 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNED1Q8TER0 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNED1Q8TER0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNED1Q8TER0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 AC006328.1-201ENST00000437571 379 ntBASIC16.84■□□□□ 0.29
SNED1Q8TER0 RHOQP2-201ENST00000449922 579 ntBASIC16.84■□□□□ 0.29
SNED1Q8TER0 MARK2P17-201ENST00000498560 841 ntBASIC16.84■□□□□ 0.29
SNED1Q8TER0 RPSAP70-201ENST00000504462 864 ntBASIC16.84■□□□□ 0.29
SNED1Q8TER0 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC16.84■□□□□ 0.29
SNED1Q8TER0 GRAMD4P6-201ENST00000556999 244 ntBASIC16.84■□□□□ 0.29
SNED1Q8TER0 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms