Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC152010.1-201ENST00000415779 2006 ntBASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 ERP29P1-201ENST00000442902 706 ntBASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC104506.1-201ENST00000609247 429 ntBASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC090502.4-201ENST00000551714 1386 ntBASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC006372.4-201ENST00000624122 1543 ntBASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 LINC01815-202ENST00000641468 1409 ntBASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 AC064801.2-201ENST00000625052 1303 ntBASIC14.92□□□□□ -0.02
SHKBP1Q8TBC3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 AC105206.1-202ENST00000314927 2368 ntBASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 RNA5SP417-201ENST00000516459 108 ntBASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 RN7SL665P-201ENST00000578793 300 ntBASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 MIR2392-201ENST00000584881 84 ntBASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 AL132780.4-201ENST00000624870 1135 ntBASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHKBP1Q8TBC3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms