Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 AL512430.1-201ENST00000392575 860 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 AL627422.1-201ENST00000434104 580 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 RN7SL81P-201ENST00000493781 261 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 SIGLEC22P-201ENST00000599104 714 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 YRDCP1-201ENST00000621419 643 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 AL139158.3-201ENST00000641212 1562 ntBASIC15.26■□□□□ 0.03
BEST2Q8NFU1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BEST2Q8NFU1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 AC098934.1-203ENST00000442868 1262 ntBASIC15.25■□□□□ 0.03
BEST2Q8NFU1 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 AC098935.1-201ENST00000446057 611 ntBASIC15.25■□□□□ 0.03
BEST2Q8NFU1 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 SLC25A15P3-201ENST00000505530 290 ntBASIC15.25■□□□□ 0.03
BEST2Q8NFU1 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 AC138701.2-201ENST00000553634 226 ntBASIC15.25■□□□□ 0.03
BEST2Q8NFU1 RN7SL455P-201ENST00000580629 282 ntBASIC15.25■□□□□ 0.03
BEST2Q8NFU1 BAP1-211ENST00000615113 489 ntBASIC15.25■□□□□ 0.03
BEST2Q8NFU1 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 AL805961.1-201ENST00000642026 753 ntBASIC15.25■□□□□ 0.03
BEST2Q8NFU1 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 USP3-204ENST00000540797 5474 ntTSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
BEST2Q8NFU1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC090643.2-201ENST00000623442 2029 ntBASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC027601.5-201ENST00000624065 2482 ntBASIC15.24■□□□□ 0.03
BEST2Q8NFU1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
BEST2Q8NFU1 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms