Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.21■□□□□ 0.03
TMEM139Q8IV31 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 AL355864.2-201ENST00000447420 863 ntBASIC15.21■□□□□ 0.03
TMEM139Q8IV31 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 USP32P1-208ENST00000506594 1164 ntBASIC15.21■□□□□ 0.03
TMEM139Q8IV31 PGAM1P5-201ENST00000548011 764 ntBASIC15.21■□□□□ 0.03
TMEM139Q8IV31 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 AL591471.1-201ENST00000621855 229 ntBASIC15.21■□□□□ 0.03
TMEM139Q8IV31 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMEM139Q8IV31 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 CICP9-201ENST00000444451 1913 ntBASIC15.21■□□□□ 0.02
TMEM139Q8IV31 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.21■□□□□ 0.02
TMEM139Q8IV31 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 LINC01815-202ENST00000641468 1409 ntBASIC15.2■□□□□ 0.02
TMEM139Q8IV31 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 FAM207CP-201ENST00000443486 507 ntBASIC15.2■□□□□ 0.02
TMEM139Q8IV31 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 FTH1P14-201ENST00000482930 551 ntBASIC15.2■□□□□ 0.02
TMEM139Q8IV31 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 TP53TG3HP-202ENST00000569755 579 ntBASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 LINC02560-201ENST00000596379 459 ntBASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 AC138951.2-201ENST00000623455 1161 ntBASIC15.2■□□□□ 0.02
TMEM139Q8IV31 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMEM139Q8IV31 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM139Q8IV31 AP002353.1-201ENST00000528257 1599 ntBASIC15.19■□□□□ 0.02
TMEM139Q8IV31 AL139158.3-201ENST00000641212 1562 ntBASIC15.19■□□□□ 0.02
TMEM139Q8IV31 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TMEM139Q8IV31 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.19■□□□□ 0.02
TMEM139Q8IV31 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM139Q8IV31 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM139Q8IV31 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMEM139Q8IV31 AC144522.1-201ENST00000625111 1658 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms