Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AL512310.5-201ENST00000551999 515 ntBASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AP000322.3-201ENST00000608665 388 ntBASIC15.83■□□□□ 0.12
TRIM50Q86XT4 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRIM50Q86XT4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 RPL13AP19-201ENST00000434320 584 ntBASIC15.82■□□□□ 0.12
TRIM50Q86XT4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 AC098934.1-203ENST00000442868 1262 ntBASIC15.82■□□□□ 0.12
TRIM50Q86XT4 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 AC068867.1-201ENST00000559855 150 ntBASIC15.82■□□□□ 0.12
TRIM50Q86XT4 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 KRT8P18-201ENST00000413425 1445 ntBASIC15.82■□□□□ 0.12
TRIM50Q86XT4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 AC007952.5-201ENST00000572818 1486 ntBASIC15.82■□□□□ 0.12
TRIM50Q86XT4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 AC025271.4-201ENST00000621477 1726 ntBASIC15.82■□□□□ 0.12
TRIM50Q86XT4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM50Q86XT4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 LINC02486-201ENST00000604157 3000 ntBASIC15.81■□□□□ 0.12
TRIM50Q86XT4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM50Q86XT4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms