Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC12.31□□□□□ -0.44
ACTBP60709 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
ACTBP60709 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 AL442647.2-201ENST00000429864 857 ntBASIC12.31□□□□□ -0.44
ACTBP60709 MYCLP2-201ENST00000449268 967 ntBASIC12.31□□□□□ -0.44
ACTBP60709 ALG3P1-201ENST00000508806 1114 ntBASIC12.31□□□□□ -0.44
ACTBP60709 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.31□□□□□ -0.44
ACTBP60709 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.31□□□□□ -0.44
ACTBP60709 AC092552.1-201ENST00000547243 906 ntBASIC12.31□□□□□ -0.44
ACTBP60709 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.31□□□□□ -0.44
ACTBP60709 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 AC120045.2-201ENST00000567334 178 ntBASIC12.31□□□□□ -0.44
ACTBP60709 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.31□□□□□ -0.44
ACTBP60709 CHCHD2P3-201ENST00000603038 451 ntBASIC12.31□□□□□ -0.44
ACTBP60709 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.31□□□□□ -0.44
ACTBP60709 BX088702.1-201ENST00000610784 235 ntBASIC12.31□□□□□ -0.44
ACTBP60709 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ACTBP60709 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 AL445250.1-201ENST00000641671 2259 ntBASIC12.31□□□□□ -0.44
ACTBP60709 PDIA3P1-201ENST00000471856 1510 ntBASIC12.31□□□□□ -0.44
ACTBP60709 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.31□□□□□ -0.44
ACTBP60709 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
ACTBP60709 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
ACTBP60709 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ACTBP60709 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ACTBP60709 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.3□□□□□ -0.44
ACTBP60709 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.3□□□□□ -0.44
ACTBP60709 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ACTBP60709 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.3□□□□□ -0.44
ACTBP60709 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ACTBP60709 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.3□□□□□ -0.44
ACTBP60709 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 RN7SKP230-201ENST00000365642 335 ntBASIC12.3□□□□□ -0.44
ACTBP60709 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ACTBP60709 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
ACTBP60709 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ACTBP60709 C1QBPP1-201ENST00000400117 770 ntBASIC12.3□□□□□ -0.44
ACTBP60709 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.3□□□□□ -0.44
ACTBP60709 HMGN1P19-201ENST00000436976 333 ntBASIC12.3□□□□□ -0.44
ACTBP60709 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.3□□□□□ -0.44
ACTBP60709 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.3□□□□□ -0.44
ACTBP60709 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.3□□□□□ -0.44
ACTBP60709 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.3□□□□□ -0.44
ACTBP60709 API5-211ENST00000534695 560 ntTSL 5 BASIC12.3□□□□□ -0.44
ACTBP60709 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.3□□□□□ -0.44
ACTBP60709 AC140912.1-201ENST00000577171 1054 ntBASIC12.3□□□□□ -0.44
ACTBP60709 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.3□□□□□ -0.44
ACTBP60709 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ACTBP60709 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.3□□□□□ -0.44
ACTBP60709 TMEM261P1-201ENST00000604899 340 ntBASIC12.3□□□□□ -0.44
ACTBP60709 AC138696.2-201ENST00000607376 223 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms