Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CLDN20P56880 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CLDN20P56880 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CLDN20P56880 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
CLDN20P56880 AC090505.1-201ENST00000430515 1834 ntBASIC13.11□□□□□ -0.31
CLDN20P56880 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 AL118506.1-201ENST00000601296 3082 ntBASIC13.11□□□□□ -0.31
CLDN20P56880 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLDN20P56880 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CLDN20P56880 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDN20P56880 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 MARK2P5-201ENST00000507649 634 ntBASIC13.11□□□□□ -0.31
CLDN20P56880 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.11□□□□□ -0.31
CLDN20P56880 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 AC027237.1-201ENST00000560942 655 ntBASIC13.11□□□□□ -0.31
CLDN20P56880 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.11□□□□□ -0.31
CLDN20P56880 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 AC133540.1-201ENST00000620845 1019 ntBASIC13.11□□□□□ -0.31
CLDN20P56880 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
CLDN20P56880 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.11□□□□□ -0.31
CLDN20P56880 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
CLDN20P56880 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CLDN20P56880 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CLDN20P56880 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CLDN20P56880 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 CALR4P-201ENST00000431943 946 ntBASIC13.1□□□□□ -0.31
CLDN20P56880 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.1□□□□□ -0.31
CLDN20P56880 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN20P56880 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN20P56880 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 AC009779.1-201ENST00000551138 283 ntBASIC13.1□□□□□ -0.31
CLDN20P56880 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.1□□□□□ -0.31
CLDN20P56880 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN20P56880 ACTG1P17-201ENST00000558391 1119 ntBASIC13.1□□□□□ -0.31
CLDN20P56880 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CLDN20P56880 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.1□□□□□ -0.31
CLDN20P56880 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.1□□□□□ -0.31
CLDN20P56880 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms