Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 BRD7P5-201ENST00000299197 1822 ntBASIC10.44□□□□□ -0.74
APOC4P55056 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 CICP24-201ENST00000605464 2705 ntBASIC10.44□□□□□ -0.74
APOC4P55056 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
APOC4P55056 UFM1-202ENST00000379649 846 ntTSL 4 BASIC10.44□□□□□ -0.74
APOC4P55056 AC103592.1-201ENST00000394513 664 ntBASIC10.44□□□□□ -0.74
APOC4P55056 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC10.44□□□□□ -0.74
APOC4P55056 HMGA1P1-201ENST00000415560 1062 ntBASIC10.44□□□□□ -0.74
APOC4P55056 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.44□□□□□ -0.74
APOC4P55056 AL627422.1-201ENST00000434104 580 ntBASIC10.44□□□□□ -0.74
APOC4P55056 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.44□□□□□ -0.74
APOC4P55056 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC10.44□□□□□ -0.74
APOC4P55056 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.44□□□□□ -0.74
APOC4P55056 FTH1P22-201ENST00000456305 520 ntBASIC10.44□□□□□ -0.74
APOC4P55056 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
APOC4P55056 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 GOLGA2P8-201ENST00000505201 779 ntBASIC10.44□□□□□ -0.74
APOC4P55056 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC10.44□□□□□ -0.74
APOC4P55056 LY6E-208ENST00000520531 490 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 AC007718.1-201ENST00000621078 280 ntBASIC10.44□□□□□ -0.74
APOC4P55056 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC10.44□□□□□ -0.74
APOC4P55056 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 AC007686.3-201ENST00000619017 3487 ntBASIC10.44□□□□□ -0.74
APOC4P55056 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 PCDHA5-203ENST00000614258 4248 ntBASIC10.44□□□□□ -0.74
APOC4P55056 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
APOC4P55056 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC10.44□□□□□ -0.74
APOC4P55056 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.44□□□□□ -0.74
APOC4P55056 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
APOC4P55056 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 TUBB8P4-201ENST00000511806 1324 ntBASIC10.43□□□□□ -0.74
APOC4P55056 AC090114.2-201ENST00000608477 7054 ntBASIC10.43□□□□□ -0.74
APOC4P55056 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
APOC4P55056 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC10.43□□□□□ -0.74
APOC4P55056 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
APOC4P55056 BX679664.3-201ENST00000414070 555 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms