Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
ATRXP46100 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC12.82□□□□□ -0.36
ATRXP46100 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.82□□□□□ -0.36
ATRXP46100 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.82□□□□□ -0.36
ATRXP46100 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
ATRXP46100 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATRXP46100 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC12.82□□□□□ -0.36
ATRXP46100 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC12.82□□□□□ -0.36
ATRXP46100 Z84721.1-201ENST00000438841 372 ntBASIC12.82□□□□□ -0.36
ATRXP46100 HNRNPA1P10-201ENST00000444945 962 ntBASIC12.82□□□□□ -0.36
ATRXP46100 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ATRXP46100 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.82□□□□□ -0.36
ATRXP46100 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC12.82□□□□□ -0.36
ATRXP46100 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC12.82□□□□□ -0.36
ATRXP46100 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.82□□□□□ -0.36
ATRXP46100 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.82□□□□□ -0.36
ATRXP46100 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC12.82□□□□□ -0.36
ATRXP46100 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATRXP46100 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 KRT8P18-201ENST00000413425 1445 ntBASIC12.81□□□□□ -0.36
ATRXP46100 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
ATRXP46100 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.81□□□□□ -0.36
ATRXP46100 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 AL136084.1-201ENST00000449172 318 ntBASIC12.81□□□□□ -0.36
ATRXP46100 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 AL355075.5-201ENST00000553568 890 ntBASIC12.81□□□□□ -0.36
ATRXP46100 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC12.81□□□□□ -0.36
ATRXP46100 MIR4265-201ENST00000582152 99 ntBASIC12.81□□□□□ -0.36
ATRXP46100 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.81□□□□□ -0.36
ATRXP46100 RPS5-205ENST00000598495 800 ntTSL 3 BASIC12.81□□□□□ -0.36
ATRXP46100 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ATRXP46100 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC12.81□□□□□ -0.36
ATRXP46100 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AC026336.4-201ENST00000624565 1050 ntBASIC12.81□□□□□ -0.36
ATRXP46100 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 PIGA-209ENST00000634582 965 ntTSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.81□□□□□ -0.36
ATRXP46100 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ATRXP46100 AC023024.2-201ENST00000623561 1993 ntBASIC12.81□□□□□ -0.36
ATRXP46100 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ATRXP46100 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AL031590.1-202ENST00000641466 1737 ntBASIC12.81□□□□□ -0.36
ATRXP46100 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AC136621.1-201ENST00000624017 2304 ntBASIC12.81□□□□□ -0.36
ATRXP46100 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 MROH4P-201ENST00000431302 1578 ntBASIC12.81□□□□□ -0.36
ATRXP46100 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
ATRXP46100 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AL358115.1-202ENST00000455257 675 ntTSL 3 BASIC12.81□□□□□ -0.36
ATRXP46100 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 MIR4726-201ENST00000615971 58 ntBASIC12.81□□□□□ -0.36
ATRXP46100 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 AL591471.1-201ENST00000621855 229 ntBASIC12.81□□□□□ -0.36
ATRXP46100 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
ATRXP46100 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ATRXP46100 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ATRXP46100 LINC00115-201ENST00000473798 1317 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms