Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
GRIA1P42261 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 AC103592.1-201ENST00000394513 664 ntBASIC14.43□□□□□ -0.1
GRIA1P42261 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.43□□□□□ -0.1
GRIA1P42261 FAM21FP-201ENST00000426241 1131 ntBASIC14.43□□□□□ -0.1
GRIA1P42261 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.43□□□□□ -0.1
GRIA1P42261 IGHV3-71-201ENST00000523324 359 ntBASIC14.43□□□□□ -0.1
GRIA1P42261 AC140658.4-201ENST00000561990 352 ntBASIC14.43□□□□□ -0.1
GRIA1P42261 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.43□□□□□ -0.1
GRIA1P42261 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.43□□□□□ -0.1
GRIA1P42261 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.43□□□□□ -0.1
GRIA1P42261 AC017083.2-201ENST00000608069 979 ntBASIC14.43□□□□□ -0.1
GRIA1P42261 AC004623.1-201ENST00000624592 2127 ntBASIC14.43□□□□□ -0.1
GRIA1P42261 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
GRIA1P42261 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
GRIA1P42261 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.43□□□□□ -0.1
GRIA1P42261 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.43□□□□□ -0.1
GRIA1P42261 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
GRIA1P42261 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.43□□□□□ -0.1
GRIA1P42261 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.43□□□□□ -0.1
GRIA1P42261 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
GRIA1P42261 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 AHCYP4-201ENST00000419201 1315 ntBASIC14.42□□□□□ -0.1
GRIA1P42261 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GRIA1P42261 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 AC018735.1-201ENST00000437208 1502 ntBASIC14.42□□□□□ -0.1
GRIA1P42261 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
GRIA1P42261 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
GRIA1P42261 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
GRIA1P42261 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.42□□□□□ -0.1
GRIA1P42261 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 AC104073.2-201ENST00000453737 312 ntBASIC14.42□□□□□ -0.1
GRIA1P42261 RNA5SP412-201ENST00000516234 123 ntBASIC14.42□□□□□ -0.1
GRIA1P42261 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.42□□□□□ -0.1
GRIA1P42261 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 AC114271.1-201ENST00000612689 2813 ntBASIC14.42□□□□□ -0.1
GRIA1P42261 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 AC027612.1-201ENST00000445234 2395 ntBASIC14.42□□□□□ -0.1
GRIA1P42261 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
GRIA1P42261 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
GRIA1P42261 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
GRIA1P42261 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
GRIA1P42261 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
GRIA1P42261 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
GRIA1P42261 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.41□□□□□ -0.1
GRIA1P42261 SHMT1P1-201ENST00000419974 1312 ntBASIC14.41□□□□□ -0.1
GRIA1P42261 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GRIA1P42261 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GRIA1P42261 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.41□□□□□ -0.1
GRIA1P42261 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
GRIA1P42261 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
GRIA1P42261 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
GRIA1P42261 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.41□□□□□ -0.1
GRIA1P42261 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
GRIA1P42261 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.41□□□□□ -0.1
GRIA1P42261 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.41□□□□□ -0.1
GRIA1P42261 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms