Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HMGCLP35914 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGCLP35914 NDUFB10P1-201ENST00000567319 521 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGCLP35914 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGCLP35914 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGCLP35914 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGCLP35914 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 AL353770.1-201ENST00000614915 403 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 AC079336.7-201ENST00000623428 1078 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 CU633904.3-201ENST00000624042 1029 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGCLP35914 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 AC072061.1-201ENST00000569710 2234 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 AC079781.5-202ENST00000641784 3743 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCLP35914 FAM90A2P-201ENST00000511144 1395 ntBASIC14.11□□□□□ -0.15
HMGCLP35914 FAM90A25P-201ENST00000528404 1395 ntBASIC14.11□□□□□ -0.15
HMGCLP35914 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HMGCLP35914 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGCLP35914 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGCLP35914 AC073869.2-201ENST00000417338 1026 ntBASIC14.11□□□□□ -0.15
HMGCLP35914 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCLP35914 AL133466.1-201ENST00000447582 150 ntBASIC14.11□□□□□ -0.15
HMGCLP35914 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.11□□□□□ -0.15
HMGCLP35914 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 RN7SL574P-201ENST00000581512 297 ntBASIC14.11□□□□□ -0.15
HMGCLP35914 AC010327.5-201ENST00000586923 3061 ntBASIC14.11□□□□□ -0.15
HMGCLP35914 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.11□□□□□ -0.15
HMGCLP35914 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
HMGCLP35914 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
HMGCLP35914 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGCLP35914 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HMGCLP35914 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 MARK2P16-201ENST00000605714 1723 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGCLP35914 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
HMGCLP35914 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.1□□□□□ -0.15
HMGCLP35914 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 AL662890.1-201ENST00000396818 632 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 PPP1R2P4-201ENST00000424051 595 ntBASIC14.1□□□□□ -0.15
HMGCLP35914 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HMGCLP35914 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.1□□□□□ -0.15
HMGCLP35914 DUTP3-201ENST00000450025 415 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms