Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 ACTG1P11-201ENST00000425411 1125 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 AL596276.2-201ENST00000447525 331 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.63□□□□□ -0.07
ERCC2P18074 SPTLC1P5-201ENST00000450718 252 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 AC090857.1-201ENST00000527400 390 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 AC244093.1-201ENST00000610837 814 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.63□□□□□ -0.07
ERCC2P18074 AC091544.8-201ENST00000619490 361 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.63□□□□□ -0.07
ERCC2P18074 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.63□□□□□ -0.07
ERCC2P18074 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 FRMPD2B-201ENST00000431305 1347 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERCC2P18074 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 AC061965.1-201ENST00000560524 1465 ntBASIC14.63□□□□□ -0.07
ERCC2P18074 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.63□□□□□ -0.07
ERCC2P18074 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.63□□□□□ -0.07
ERCC2P18074 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERCC2P18074 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.62□□□□□ -0.07
ERCC2P18074 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ERCC2P18074 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 OR8T1P-201ENST00000421347 918 ntBASIC14.62□□□□□ -0.07
ERCC2P18074 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC2P18074 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC2P18074 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC2P18074 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC2P18074 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ERCC2P18074 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.62□□□□□ -0.07
ERCC2P18074 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC2P18074 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.62□□□□□ -0.07
ERCC2P18074 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 NDUFV2P1-201ENST00000596415 907 ntBASIC14.62□□□□□ -0.07
ERCC2P18074 MEG3_2.1-201ENST00000611456 105 ntBASIC14.62□□□□□ -0.07
ERCC2P18074 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
ERCC2P18074 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.62□□□□□ -0.07
ERCC2P18074 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
ERCC2P18074 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ERCC2P18074 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.62□□□□□ -0.07
ERCC2P18074 AC068760.1-201ENST00000493579 1953 ntBASIC14.62□□□□□ -0.07
ERCC2P18074 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.62□□□□□ -0.07
ERCC2P18074 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERCC2P18074 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERCC2P18074 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms