Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC108725.1-201ENST00000495472 409 ntBASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC005740.2-201ENST00000511085 419 ntBASIC12.78□□□□□ -0.36
HLA-DOBP13765 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC126915.1-201ENST00000522847 1038 ntBASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC009779.1-201ENST00000551138 283 ntBASIC12.78□□□□□ -0.36
HLA-DOBP13765 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 AL118558.3-201ENST00000607414 1079 ntBASIC12.78□□□□□ -0.36
HLA-DOBP13765 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 AC073869.1-201ENST00000415574 2762 ntBASIC12.78□□□□□ -0.36
HLA-DOBP13765 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DOBP13765 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.78□□□□□ -0.36
HLA-DOBP13765 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
HLA-DOBP13765 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.77□□□□□ -0.36
HLA-DOBP13765 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.77□□□□□ -0.36
HLA-DOBP13765 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.77□□□□□ -0.36
HLA-DOBP13765 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.77□□□□□ -0.36
HLA-DOBP13765 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HLA-DOBP13765 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.77□□□□□ -0.36
HLA-DOBP13765 AC105206.1-202ENST00000314927 2368 ntBASIC12.77□□□□□ -0.36
HLA-DOBP13765 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 AC106794.1-201ENST00000506935 792 ntBASIC12.77□□□□□ -0.37
HLA-DOBP13765 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 AL157813.1-201ENST00000612996 587 ntBASIC12.77□□□□□ -0.37
HLA-DOBP13765 AL136295.7-201ENST00000619226 1200 ntBASIC12.77□□□□□ -0.37
HLA-DOBP13765 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HLA-DOBP13765 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.77□□□□□ -0.37
HLA-DOBP13765 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms