Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC18.09■□□□□ 0.49
COL5A2P05997 MIR6893-201ENST00000613458 69 ntBASIC18.09■□□□□ 0.49
COL5A2P05997 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL5A2P05997 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 AF013593.1-201ENST00000458074 1487 ntBASIC18.09■□□□□ 0.49
COL5A2P05997 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.09■□□□□ 0.49
COL5A2P05997 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL5A2P05997 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.09■□□□□ 0.49
COL5A2P05997 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL5A2P05997 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.09■□□□□ 0.49
COL5A2P05997 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC18.08■□□□□ 0.49
COL5A2P05997 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL5A2P05997 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
COL5A2P05997 RFNG-202ENST00000429557 994 ntTSL 5 BASIC18.08■□□□□ 0.49
COL5A2P05997 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC18.08■□□□□ 0.49
COL5A2P05997 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL5A2P05997 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.49
COL5A2P05997 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.08■□□□□ 0.49
COL5A2P05997 AC090820.1-201ENST00000519722 591 ntBASIC18.08■□□□□ 0.49
COL5A2P05997 CETN3-205ENST00000522842 664 ntTSL 2 BASIC18.08■□□□□ 0.49
COL5A2P05997 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC18.08■□□□□ 0.49
COL5A2P05997 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC18.08■□□□□ 0.49
COL5A2P05997 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC18.08■□□□□ 0.49
COL5A2P05997 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC18.08■□□□□ 0.49
COL5A2P05997 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC18.08■□□□□ 0.49
COL5A2P05997 FAM83A-AS1-202ENST00000520576 1347 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
COL5A2P05997 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.08■□□□□ 0.49
COL5A2P05997 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
COL5A2P05997 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.08■□□□□ 0.49
COL5A2P05997 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL5A2P05997 DBET-201ENST00000630918 3363 ntBASIC18.08■□□□□ 0.49
COL5A2P05997 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC18.08■□□□□ 0.49
COL5A2P05997 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC18.08■□□□□ 0.49
COL5A2P05997 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC18.08■□□□□ 0.48
COL5A2P05997 BX640514.1-201ENST00000583223 1918 ntBASIC18.08■□□□□ 0.48
COL5A2P05997 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL5A2P05997 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COL5A2P05997 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL5A2P05997 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL5A2P05997 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.08■□□□□ 0.48
COL5A2P05997 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL5A2P05997 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL5A2P05997 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL5A2P05997 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COL5A2P05997 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
COL5A2P05997 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 CRIP1P2-201ENST00000425396 228 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC18.07■□□□□ 0.48
COL5A2P05997 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
COL5A2P05997 AC113398.1-201ENST00000464124 406 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 FAM86JP-202ENST00000484500 988 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 CDC37P2-201ENST00000562287 1029 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 AC034205.3-201ENST00000603595 1376 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 AC254633.1-201ENST00000606790 345 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL5A2P05997 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL5A2P05997 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 RBMXP1-201ENST00000408004 1191 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL5A2P05997 AL954722.1-201ENST00000431238 259 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 AC092865.2-201ENST00000439409 971 ntBASIC18.07■□□□□ 0.48
COL5A2P05997 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
COL5A2P05997 RPL35P1-201ENST00000450819 370 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms