Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TUBB4AP04350 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBB4AP04350 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBB4AP04350 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TUBB4AP04350 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBB4AP04350 AC005014.1-201ENST00000432006 2976 ntBASIC15.27■□□□□ 0.04
TUBB4AP04350 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBB4AP04350 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.27■□□□□ 0.04
TUBB4AP04350 FTLP10-202ENST00000505798 471 ntBASIC15.27■□□□□ 0.04
TUBB4AP04350 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.27■□□□□ 0.04
TUBB4AP04350 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.27■□□□□ 0.04
TUBB4AP04350 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TUBB4AP04350 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.27■□□□□ 0.04
TUBB4AP04350 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.27■□□□□ 0.04
TUBB4AP04350 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.27■□□□□ 0.04
TUBB4AP04350 AC093028.1-201ENST00000622998 982 ntBASIC15.27■□□□□ 0.04
TUBB4AP04350 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TUBB4AP04350 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TUBB4AP04350 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TUBB4AP04350 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBB4AP04350 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 AP000593.2-201ENST00000542775 1433 ntBASIC15.26■□□□□ 0.03
TUBB4AP04350 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TUBB4AP04350 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TUBB4AP04350 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TUBB4AP04350 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBB4AP04350 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TUBB4AP04350 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBB4AP04350 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TUBB4AP04350 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TUBB4AP04350 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBB4AP04350 AC245100.3-201ENST00000441281 285 ntBASIC15.26■□□□□ 0.03
TUBB4AP04350 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 RFPL4AP1-201ENST00000530883 850 ntBASIC15.26■□□□□ 0.03
TUBB4AP04350 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBB4AP04350 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.26■□□□□ 0.03
TUBB4AP04350 SRD5A3P1-201ENST00000603021 949 ntBASIC15.26■□□□□ 0.03
TUBB4AP04350 AL355385.1-201ENST00000606123 409 ntBASIC15.26■□□□□ 0.03
TUBB4AP04350 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TUBB4AP04350 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBB4AP04350 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBB4AP04350 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TUBB4AP04350 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms