Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.75□□□□□ -0.37
APOA1P02647 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.75□□□□□ -0.37
APOA1P02647 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOA1P02647 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.75□□□□□ -0.37
APOA1P02647 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APOA1P02647 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOA1P02647 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOA1P02647 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
APOA1P02647 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOA1P02647 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOA1P02647 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 KRT18P32-201ENST00000424695 1287 ntBASIC12.74□□□□□ -0.37
APOA1P02647 AC005237.2-201ENST00000434368 219 ntBASIC12.74□□□□□ -0.37
APOA1P02647 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.74□□□□□ -0.37
APOA1P02647 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 RPL13AP23-201ENST00000480739 586 ntBASIC12.74□□□□□ -0.37
APOA1P02647 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.74□□□□□ -0.37
APOA1P02647 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
APOA1P02647 DUX4L47-201ENST00000566374 394 ntBASIC12.74□□□□□ -0.37
APOA1P02647 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 AC124319.4-201ENST00000622931 2161 ntBASIC12.74□□□□□ -0.37
APOA1P02647 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.74□□□□□ -0.37
APOA1P02647 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOA1P02647 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
APOA1P02647 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
APOA1P02647 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
APOA1P02647 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.73□□□□□ -0.37
APOA1P02647 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
APOA1P02647 HLA-A-201ENST00000376802 1334 ntBASIC12.73□□□□□ -0.37
APOA1P02647 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.73□□□□□ -0.37
APOA1P02647 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
APOA1P02647 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.73□□□□□ -0.37
APOA1P02647 NUS1P3-201ENST00000423502 862 ntBASIC12.73□□□□□ -0.37
APOA1P02647 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
APOA1P02647 KRT18P3-201ENST00000451602 1288 ntBASIC12.73□□□□□ -0.37
APOA1P02647 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
APOA1P02647 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms