Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AIRN-201ENST00000601203 4374 ntBASIC6.1□□□□□ -1.43
USH2AO75445 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 CD37-203ENST00000426897 1204 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC6.1□□□□□ -1.43
USH2AO75445 DUT-208ENST00000559540 1441 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AL591471.1-201ENST00000621855 229 ntBASIC6.1□□□□□ -1.43
USH2AO75445 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USH2AO75445 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 CASC15-202ENST00000561912 1449 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 HNRNPA1P34-201ENST00000391992 950 ntBASIC6.1□□□□□ -1.43
USH2AO75445 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC010163.1-201ENST00000434440 520 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC010997.1-201ENST00000447646 350 ntBASIC6.1□□□□□ -1.43
USH2AO75445 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 IGHV3-60-201ENST00000521678 354 ntBASIC6.1□□□□□ -1.43
USH2AO75445 FP325317.1-201ENST00000539936 1042 ntBASIC6.1□□□□□ -1.43
USH2AO75445 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC124319.4-201ENST00000622931 2161 ntBASIC6.1□□□□□ -1.43
USH2AO75445 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC6.1□□□□□ -1.43
USH2AO75445 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 AC068760.1-201ENST00000493579 1953 ntBASIC6.09□□□□□ -1.43
USH2AO75445 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
USH2AO75445 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 DNM1P17-201ENST00000512082 426 ntBASIC6.09□□□□□ -1.43
USH2AO75445 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 AL354993.2-201ENST00000558738 542 ntTSL 4 BASIC6.09□□□□□ -1.43
USH2AO75445 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC6.09□□□□□ -1.43
USH2AO75445 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC6.09□□□□□ -1.43
USH2AO75445 CALM3-206ENST00000594523 540 ntTSL 4 BASIC6.09□□□□□ -1.43
USH2AO75445 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 AC007686.3-201ENST00000619017 3487 ntBASIC6.09□□□□□ -1.43
USH2AO75445 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
USH2AO75445 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 AL391822.1-201ENST00000452580 562 ntBASIC6.09□□□□□ -1.43
USH2AO75445 OR7E126P-201ENST00000526217 888 ntBASIC6.09□□□□□ -1.43
USH2AO75445 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC6.09□□□□□ -1.43
USH2AO75445 MIR8071-1-201ENST00000616769 65 ntBASIC6.09□□□□□ -1.43
USH2AO75445 MIR8071-2-201ENST00000616772 65 ntBASIC6.09□□□□□ -1.43
USH2AO75445 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC6.09□□□□□ -1.43
USH2AO75445 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC6.09□□□□□ -1.43
USH2AO75445 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
USH2AO75445 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms