Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
UPK2O00526 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK2O00526 AL365181.3-201ENST00000605886 3222 ntBASIC11.45□□□□□ -0.58
UPK2O00526 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK2O00526 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.45□□□□□ -0.58
UPK2O00526 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 SHMT1P1-201ENST00000419974 1312 ntBASIC11.44□□□□□ -0.58
UPK2O00526 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 AC114271.1-201ENST00000612689 2813 ntBASIC11.44□□□□□ -0.58
UPK2O00526 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.44□□□□□ -0.58
UPK2O00526 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 AGAP12P-201ENST00000585227 2359 ntBASIC11.44□□□□□ -0.58
UPK2O00526 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
UPK2O00526 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
UPK2O00526 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.44□□□□□ -0.58
UPK2O00526 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 AL160314.3-201ENST00000556041 767 ntBASIC11.44□□□□□ -0.58
UPK2O00526 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC11.44□□□□□ -0.58
UPK2O00526 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC11.44□□□□□ -0.58
UPK2O00526 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.44□□□□□ -0.58
UPK2O00526 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 AL359845.1-201ENST00000458202 1648 ntBASIC11.44□□□□□ -0.58
UPK2O00526 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 CYP4F23P-201ENST00000593402 1579 ntBASIC11.44□□□□□ -0.58
UPK2O00526 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 F2-205ENST00000530231 1849 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 AL359183.1-201ENST00000623796 2132 ntBASIC11.44□□□□□ -0.58
UPK2O00526 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK2O00526 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK2O00526 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
UPK2O00526 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.43□□□□□ -0.58
UPK2O00526 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 AHCYP4-201ENST00000419201 1315 ntBASIC11.43□□□□□ -0.58
UPK2O00526 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.43□□□□□ -0.58
UPK2O00526 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
UPK2O00526 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC11.43□□□□□ -0.58
UPK2O00526 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC11.43□□□□□ -0.58
UPK2O00526 AL354877.1-201ENST00000424412 413 ntBASIC11.43□□□□□ -0.58
UPK2O00526 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms