Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AP005019.2-201ENST00000615104 511 ntBASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 INTS4P2-202ENST00000614726 2019 ntBASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AL928654.5-201ENST00000624831 2501 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 C1QBPP1-201ENST00000400117 770 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC211486.1-202ENST00000416371 468 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC107890.1-201ENST00000422478 521 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 MEP1AP4-201ENST00000423244 1087 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC211476.1-201ENST00000503899 468 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC104596.2-201ENST00000512793 793 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 BRI3BPP1-201ENST00000594224 787 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AC100757.3-201ENST00000622361 1406 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 AL590440.2-201ENST00000641973 1595 ntBASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KCNIP3Q9Y2W7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KCNIP3Q9Y2W7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms