Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 AC105206.1-202ENST00000314927 2368 ntBASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 RPL17P45-201ENST00000586289 509 ntBASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 AL022334.2-201ENST00000610000 484 ntBASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HDAC6Q9UBN7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC012617.1-204ENST00000586340 2305 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 MAPT-IT1-201ENST00000624111 3016 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 ST13P19-201ENST00000442505 1124 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC079112.1-201ENST00000454972 939 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 RN7SL530P-201ENST00000485097 298 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC114947.1-202ENST00000514136 344 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC124068.2-201ENST00000569473 1109 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AP001065.2-201ENST00000617205 644 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC009560.1-201ENST00000620208 434 ntBASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.12■□□□□ 0.17
HDAC6Q9UBN7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms