Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 AC092978.1-202ENST00000637590 1327 ntBASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CUEDC1Q9NWM3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 CCT8L1P-201ENST00000465400 1674 ntBASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AP001505.2-201ENST00000616815 443 ntBASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 AC010327.5-201ENST00000586923 3061 ntBASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
CUEDC1Q9NWM3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.84□□□□□ -0.19
CUEDC1Q9NWM3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms