Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC006372.4-201ENST00000624122 1543 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC015909.5-201ENST00000624336 2266 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AL355334.1-201ENST00000417713 215 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MAGEA5-201ENST00000446757 942 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 RPL18AP8-201ENST00000486071 528 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ORAOV1P1-201ENST00000503108 395 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 RNA5SP417-201ENST00000516459 108 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 KRT8P1-201ENST00000557533 1207 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MIR5196-201ENST00000578146 115 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AL391001.1-201ENST00000602747 715 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC021016.3-201ENST00000608367 477 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AL392048.1-201ENST00000613946 534 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 COX6A1P2-201ENST00000620597 330 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MIR6858-201ENST00000620733 67 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC090386.2-201ENST00000623010 1039 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AP001184.1-201ENST00000637936 376 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms