Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
RAB40CQ96S21 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
RAB40CQ96S21 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
RAB40CQ96S21 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
RAB40CQ96S21 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB40CQ96S21 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.62□□□□□ -0.55
RAB40CQ96S21 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
RAB40CQ96S21 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
RAB40CQ96S21 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC073862.5-201ENST00000624129 2027 ntBASIC11.61□□□□□ -0.55
RAB40CQ96S21 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 INE1-201ENST00000456273 945 ntBASIC11.61□□□□□ -0.55
RAB40CQ96S21 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC023310.3-201ENST00000557027 670 ntBASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC100756.1-201ENST00000562736 682 ntBASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC138749.3-201ENST00000567691 622 ntBASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC116165.1-201ENST00000611806 668 ntBASIC11.61□□□□□ -0.55
RAB40CQ96S21 AC138466.3-201ENST00000619983 221 ntBASIC11.61□□□□□ -0.55
RAB40CQ96S21 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB40CQ96S21 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
RAB40CQ96S21 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.6□□□□□ -0.55
RAB40CQ96S21 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 AC118758.2-201ENST00000614242 2813 ntBASIC11.6□□□□□ -0.55
RAB40CQ96S21 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RAB40CQ96S21 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB40CQ96S21 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms