Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 GCOM2-201ENST00000509133 1104 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 SORD2P-201ENST00000558556 1069 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC103988.2-201ENST00000561804 725 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC120045.2-201ENST00000567334 178 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC009407.1-201ENST00000568958 598 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 BRI3BPP1-201ENST00000594224 787 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC139712.1-201ENST00000378256 1875 ntBASIC12.38□□□□□ -0.43
BEST4Q8NFU0 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BEST4Q8NFU0 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 AL138725.1-201ENST00000407347 1314 ntBASIC12.37□□□□□ -0.43
BEST4Q8NFU0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 MARK2P9-201ENST00000430958 1727 ntBASIC12.37□□□□□ -0.43
BEST4Q8NFU0 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 TSSK5P-201ENST00000423978 907 ntBASIC12.37□□□□□ -0.43
BEST4Q8NFU0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 TPRX2P-201ENST00000535362 881 ntBASIC12.37□□□□□ -0.43
BEST4Q8NFU0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 AL390955.2-201ENST00000603032 514 ntBASIC12.37□□□□□ -0.43
BEST4Q8NFU0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 AL805961.2-201ENST00000642139 4817 ntBASIC12.37□□□□□ -0.43
BEST4Q8NFU0 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
BEST4Q8NFU0 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms