Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AC007551.1-201ENST00000457394 519 ntBASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 KRT90P-201ENST00000549264 1064 ntBASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 BTNL10-201ENST00000595971 695 ntBASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC50Q8IVM0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 AC004241.5-201ENST00000623870 2448 ntBASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC50Q8IVM0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 AC072061.1-201ENST00000569710 2234 ntBASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC50Q8IVM0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms