Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 RN7SL277P-201ENST00000481521 288 ntBASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LYSMD3Q7Z3D4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 AL157996.1-201ENST00000624684 2299 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 RNA5SP359-201ENST00000364838 113 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 MIR769-201ENST00000390225 118 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 CYP46A4P-201ENST00000414953 267 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 AC090857.1-201ENST00000527400 390 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 RN7SL774P-201ENST00000577467 290 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 MIR3188-201ENST00000583494 85 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 SBF1P1-201ENST00000444527 5631 ntBASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LYSMD3Q7Z3D4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 AL596276.2-201ENST00000447525 331 ntBASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 AL512310.5-201ENST00000551999 515 ntBASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 AL022334.2-201ENST00000610000 484 ntBASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 LINC00115-201ENST00000473798 1317 ntBASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LYSMD3Q7Z3D4 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms