Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX7Q2KHR2 AC015909.5-201ENST00000624336 2266 ntBASIC17.02■□□□□ 0.32
RFX7Q2KHR2 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AC093462.1-201ENST00000621167 1683 ntBASIC17.02■□□□□ 0.31
RFX7Q2KHR2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AC004554.1-201ENST00000422830 1468 ntBASIC17.02■□□□□ 0.31
RFX7Q2KHR2 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AC098934.1-203ENST00000442868 1262 ntBASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AL354861.1-201ENST00000445213 355 ntBASIC17.02■□□□□ 0.31
RFX7Q2KHR2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 SLC25A15P3-201ENST00000505530 290 ntBASIC17.02■□□□□ 0.31
RFX7Q2KHR2 ALG1L13P-202ENST00000519320 584 ntBASIC17.02■□□□□ 0.31
RFX7Q2KHR2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 MIR3180-2-201ENST00000581748 88 ntBASIC17.02■□□□□ 0.31
RFX7Q2KHR2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
RFX7Q2KHR2 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 FAM90A12P-201ENST00000519497 2375 ntBASIC17.01■□□□□ 0.31
RFX7Q2KHR2 FAM90A24P-201ENST00000520792 2369 ntBASIC17.01■□□□□ 0.31
RFX7Q2KHR2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 PYY2-201ENST00000315776 282 ntBASIC17.01■□□□□ 0.31
RFX7Q2KHR2 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 CELP-201ENST00000411440 1249 ntTSL 5 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.01■□□□□ 0.31
RFX7Q2KHR2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC17■□□□□ 0.31
RFX7Q2KHR2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17■□□□□ 0.31
RFX7Q2KHR2 AC008620.2-201ENST00000510294 1569 ntBASIC17■□□□□ 0.31
RFX7Q2KHR2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 AC025183.3-201ENST00000623526 1482 ntBASIC17■□□□□ 0.31
RFX7Q2KHR2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17■□□□□ 0.31
RFX7Q2KHR2 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC17■□□□□ 0.31
RFX7Q2KHR2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
RFX7Q2KHR2 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
RFX7Q2KHR2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms