Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.66■□□□□ 0.26
IRX3P78415 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.66■□□□□ 0.26
IRX3P78415 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IRX3P78415 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
IRX3P78415 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX3P78415 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX3P78415 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.65■□□□□ 0.26
IRX3P78415 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.65■□□□□ 0.26
IRX3P78415 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX3P78415 OR5BD1P-201ENST00000532527 817 ntBASIC16.65■□□□□ 0.26
IRX3P78415 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.65■□□□□ 0.26
IRX3P78415 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.65■□□□□ 0.26
IRX3P78415 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 AC138466.5-201ENST00000624002 808 ntBASIC16.65■□□□□ 0.26
IRX3P78415 LINC00431-202ENST00000636375 159 ntBASIC16.65■□□□□ 0.26
IRX3P78415 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
IRX3P78415 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IRX3P78415 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IRX3P78415 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
IRX3P78415 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
IRX3P78415 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 BRD7P5-201ENST00000299197 1822 ntBASIC16.64■□□□□ 0.25
IRX3P78415 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
IRX3P78415 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.64■□□□□ 0.25
IRX3P78415 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 AC084752.1-201ENST00000509766 622 ntBASIC16.64■□□□□ 0.25
IRX3P78415 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 MIR5196-201ENST00000578146 115 ntBASIC16.64■□□□□ 0.25
IRX3P78415 MIR2392-201ENST00000584881 84 ntBASIC16.64■□□□□ 0.25
IRX3P78415 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 POM121L4P-202ENST00000427789 1891 ntBASIC16.64■□□□□ 0.25
IRX3P78415 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 AC006372.4-201ENST00000624122 1543 ntBASIC16.64■□□□□ 0.25
IRX3P78415 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.64■□□□□ 0.25
IRX3P78415 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.64■□□□□ 0.25
IRX3P78415 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.64■□□□□ 0.25
IRX3P78415 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
IRX3P78415 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms