Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 EEF1DP2-201ENST00000433698 843 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.8□□□□□ -0.04
ERVFC1P60507 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.8□□□□□ -0.04
ERVFC1P60507 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC078814.4-201ENST00000546650 327 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.8□□□□□ -0.04
ERVFC1P60507 AL359219.1-201ENST00000556311 934 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.8□□□□□ -0.04
ERVFC1P60507 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.8□□□□□ -0.04
ERVFC1P60507 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC026336.4-201ENST00000624565 1050 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 AL590824.1-201ENST00000403828 1349 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC092384.3-202ENST00000564646 2873 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.8□□□□□ -0.04
ERVFC1P60507 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ERVFC1P60507 AC068760.1-201ENST00000493579 1953 ntBASIC14.8□□□□□ -0.04
ERVFC1P60507 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ERVFC1P60507 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ERVFC1P60507 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ERVFC1P60507 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ERVFC1P60507 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ERVFC1P60507 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC14.79□□□□□ -0.04
ERVFC1P60507 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.79□□□□□ -0.04
ERVFC1P60507 ACTBP14-201ENST00000411655 1089 ntBASIC14.79□□□□□ -0.04
ERVFC1P60507 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.79□□□□□ -0.04
ERVFC1P60507 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.79□□□□□ -0.04
ERVFC1P60507 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.79□□□□□ -0.04
ERVFC1P60507 NRADDP-201ENST00000437305 691 ntBASIC14.79□□□□□ -0.04
ERVFC1P60507 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.79□□□□□ -0.04
ERVFC1P60507 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 AC092896.1-201ENST00000465850 380 ntBASIC14.79□□□□□ -0.04
ERVFC1P60507 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ERVFC1P60507 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ERVFC1P60507 URAHP-205ENST00000610227 398 ntBASIC14.79□□□□□ -0.04
ERVFC1P60507 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ERVFC1P60507 AL139158.3-201ENST00000641212 1562 ntBASIC14.79□□□□□ -0.04
ERVFC1P60507 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.79□□□□□ -0.04
ERVFC1P60507 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ERVFC1P60507 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ERVFC1P60507 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
ERVFC1P60507 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
ERVFC1P60507 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ERVFC1P60507 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.78□□□□□ -0.04
ERVFC1P60507 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ERVFC1P60507 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ERVFC1P60507 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.78□□□□□ -0.04
ERVFC1P60507 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.78□□□□□ -0.04
ERVFC1P60507 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.78□□□□□ -0.04
ERVFC1P60507 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ERVFC1P60507 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
ERVFC1P60507 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms