Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 RN7SKP175-201ENST00000408472 289 ntBASIC13.05□□□□□ -0.32
CENPAP49450 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.05□□□□□ -0.32
CENPAP49450 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CENPAP49450 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.05□□□□□ -0.32
CENPAP49450 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.05□□□□□ -0.32
CENPAP49450 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 AC005586.2-201ENST00000563946 837 ntBASIC13.05□□□□□ -0.32
CENPAP49450 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 AC025279.2-201ENST00000569730 653 ntBASIC13.05□□□□□ -0.32
CENPAP49450 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CENPAP49450 AC090643.2-201ENST00000623442 2029 ntBASIC13.05□□□□□ -0.32
CENPAP49450 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CENPAP49450 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.05□□□□□ -0.32
CENPAP49450 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CENPAP49450 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CENPAP49450 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 AC015818.8-201ENST00000587907 1519 ntBASIC13.04□□□□□ -0.32
CENPAP49450 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CENPAP49450 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CENPAP49450 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.04□□□□□ -0.32
CENPAP49450 TTTY23B-201ENST00000442790 549 ntBASIC13.04□□□□□ -0.32
CENPAP49450 RN7SL692P-201ENST00000464677 288 ntBASIC13.04□□□□□ -0.32
CENPAP49450 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.04□□□□□ -0.32
CENPAP49450 RNA5SP486-201ENST00000515961 83 ntBASIC13.04□□□□□ -0.32
CENPAP49450 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.04□□□□□ -0.32
CENPAP49450 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CENPAP49450 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 AL022328.1-201ENST00000610050 478 ntBASIC13.04□□□□□ -0.32
CENPAP49450 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.04□□□□□ -0.32
CENPAP49450 AC002472.3-201ENST00000640124 621 ntBASIC13.04□□□□□ -0.32
CENPAP49450 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CENPAP49450 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 AC089987.1-201ENST00000551654 2209 ntBASIC13.04□□□□□ -0.32
CENPAP49450 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.04□□□□□ -0.32
CENPAP49450 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms