Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFX5P48382 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX5P48382 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RFX5P48382 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 AC073869.1-201ENST00000415574 2762 ntBASIC17.21■□□□□ 0.35
RFX5P48382 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFX5P48382 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX5P48382 AC073210.1-201ENST00000414799 232 ntBASIC17.21■□□□□ 0.35
RFX5P48382 AC253536.4-201ENST00000440539 267 ntBASIC17.21■□□□□ 0.35
RFX5P48382 AC004837.1-201ENST00000446267 564 ntBASIC17.21■□□□□ 0.35
RFX5P48382 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX5P48382 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX5P48382 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX5P48382 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFX5P48382 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX5P48382 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC17.21■□□□□ 0.34
RFX5P48382 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX5P48382 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX5P48382 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX5P48382 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX5P48382 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX5P48382 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFX5P48382 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
RFX5P48382 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX5P48382 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFX5P48382 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFX5P48382 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RFX5P48382 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RFX5P48382 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 OR2W2P-201ENST00000406313 909 ntBASIC17.2■□□□□ 0.34
RFX5P48382 SNORA50C-201ENST00000408535 133 ntBASIC17.2■□□□□ 0.34
RFX5P48382 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX5P48382 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.2■□□□□ 0.34
RFX5P48382 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.2■□□□□ 0.34
RFX5P48382 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC17.2■□□□□ 0.34
RFX5P48382 AC007279.1-201ENST00000448547 837 ntBASIC17.2■□□□□ 0.34
RFX5P48382 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC17.2■□□□□ 0.34
RFX5P48382 LDHBP1-201ENST00000455730 1119 ntBASIC17.2■□□□□ 0.34
RFX5P48382 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RFX5P48382 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.2■□□□□ 0.34
RFX5P48382 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX5P48382 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.2■□□□□ 0.34
RFX5P48382 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.2■□□□□ 0.34
RFX5P48382 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RFX5P48382 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RFX5P48382 SNORA50.1-201ENST00000628590 135 ntBASIC17.2■□□□□ 0.34
RFX5P48382 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX5P48382 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX5P48382 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms