Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC026316.1-201ENST00000398900 414 ntBASIC15.32■□□□□ 0.04
TNFSF9P41273 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFSF9P41273 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFSF9P41273 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.32■□□□□ 0.04
TNFSF9P41273 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TNFSF9P41273 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC005632.3-201ENST00000605544 308 ntBASIC15.32■□□□□ 0.04
TNFSF9P41273 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 KRT8P18-201ENST00000413425 1445 ntBASIC15.32■□□□□ 0.04
TNFSF9P41273 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.32■□□□□ 0.04
TNFSF9P41273 RCC2P1-201ENST00000452257 1476 ntBASIC15.32■□□□□ 0.04
TNFSF9P41273 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 AC006372.4-201ENST00000624122 1543 ntBASIC15.32■□□□□ 0.04
TNFSF9P41273 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.32■□□□□ 0.04
TNFSF9P41273 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TNFSF9P41273 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TNFSF9P41273 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF9P41273 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 AL627422.1-201ENST00000434104 580 ntBASIC15.31■□□□□ 0.04
TNFSF9P41273 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF9P41273 MAGEA5-201ENST00000446757 942 ntBASIC15.31■□□□□ 0.04
TNFSF9P41273 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF9P41273 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF9P41273 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.31■□□□□ 0.04
TNFSF9P41273 RN7SL665P-201ENST00000578793 300 ntBASIC15.31■□□□□ 0.04
TNFSF9P41273 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.31■□□□□ 0.04
TNFSF9P41273 AC084781.1-201ENST00000613737 656 ntBASIC15.31■□□□□ 0.04
TNFSF9P41273 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TNFSF9P41273 AC128714.1-201ENST00000637035 887 ntBASIC15.31■□□□□ 0.04
TNFSF9P41273 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TNFSF9P41273 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TNFSF9P41273 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.31■□□□□ 0.04
TNFSF9P41273 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
TNFSF9P41273 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TNFSF9P41273 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TNFSF9P41273 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TNFSF9P41273 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TNFSF9P41273 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TNFSF9P41273 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNFSF9P41273 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms