Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC5P40937 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 AC067750.1-201ENST00000608826 6545 ntBASIC15.68■□□□□ 0.1
RFC5P40937 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC5P40937 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFC5P40937 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.68■□□□□ 0.1
RFC5P40937 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC5P40937 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.68■□□□□ 0.1
RFC5P40937 SLC25A15P3-201ENST00000505530 290 ntBASIC15.68■□□□□ 0.1
RFC5P40937 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.68■□□□□ 0.1
RFC5P40937 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.68■□□□□ 0.1
RFC5P40937 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 RN7SL190P-201ENST00000582519 257 ntBASIC15.68■□□□□ 0.1
RFC5P40937 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.68■□□□□ 0.1
RFC5P40937 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.68■□□□□ 0.1
RFC5P40937 AL805961.1-201ENST00000642026 753 ntBASIC15.68■□□□□ 0.1
RFC5P40937 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RFC5P40937 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RFC5P40937 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RFC5P40937 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RFC5P40937 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RFC5P40937 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC5P40937 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC5P40937 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RFC5P40937 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 MIR33B-201ENST00000385104 96 ntBASIC15.67■□□□□ 0.1
RFC5P40937 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.67■□□□□ 0.1
RFC5P40937 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.67■□□□□ 0.1
RFC5P40937 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC5P40937 BAP1-211ENST00000615113 489 ntBASIC15.67■□□□□ 0.1
RFC5P40937 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.67■□□□□ 0.1
RFC5P40937 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.67■□□□□ 0.1
RFC5P40937 AC009145.4-201ENST00000625119 1294 ntBASIC15.67■□□□□ 0.1
RFC5P40937 AP001184.1-201ENST00000637936 376 ntBASIC15.67■□□□□ 0.1
RFC5P40937 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RFC5P40937 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.67■□□□□ 0.1
RFC5P40937 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RFC5P40937 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms