Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.06■□□□□ 0
RFC1P35251 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RFC1P35251 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RFC1P35251 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.05■□□□□ 0
RFC1P35251 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RFC1P35251 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
RFC1P35251 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFC1P35251 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RFC1P35251 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.05■□□□□ 0
RFC1P35251 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.05■□□□□ 0
RFC1P35251 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFC1P35251 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RFC1P35251 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFC1P35251 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RFC1P35251 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.05■□□□□ 0
RFC1P35251 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
RFC1P35251 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RFC1P35251 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.05■□□□□ -0
RFC1P35251 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
RFC1P35251 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RFC1P35251 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.05■□□□□ -0
RFC1P35251 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.05■□□□□ -0
RFC1P35251 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.05■□□□□ -0
RFC1P35251 MIR1908-201ENST00000410394 80 ntBASIC15.05■□□□□ -0
RFC1P35251 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.05■□□□□ -0
RFC1P35251 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.05■□□□□ -0
RFC1P35251 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.05■□□□□ -0
RFC1P35251 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.05■□□□□ -0
RFC1P35251 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.05■□□□□ -0
RFC1P35251 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.05■□□□□ -0
RFC1P35251 AL512310.5-201ENST00000551999 515 ntBASIC15.05■□□□□ -0
RFC1P35251 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.05■□□□□ -0
RFC1P35251 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.05■□□□□ -0
RFC1P35251 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.05■□□□□ -0
RFC1P35251 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.05■□□□□ -0
RFC1P35251 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RFC1P35251 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
RFC1P35251 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.05■□□□□ -0
RFC1P35251 AC007952.5-201ENST00000572818 1486 ntBASIC15.05■□□□□ -0
RFC1P35251 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.05■□□□□ -0
RFC1P35251 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC15.05■□□□□ -0
RFC1P35251 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFC1P35251 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.04■□□□□ -0
RFC1P35251 FAM90A12P-201ENST00000519497 2375 ntBASIC15.04■□□□□ -0
RFC1P35251 FAM90A24P-201ENST00000520792 2369 ntBASIC15.04■□□□□ -0
RFC1P35251 AC072061.1-201ENST00000569710 2234 ntBASIC15.04■□□□□ -0
RFC1P35251 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.04■□□□□ -0
RFC1P35251 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.04■□□□□ -0
RFC1P35251 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.04■□□□□ -0
RFC1P35251 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RFC1P35251 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.04■□□□□ -0
RFC1P35251 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.04■□□□□ -0
RFC1P35251 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.04■□□□□ -0
RFC1P35251 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.04■□□□□ -0
RFC1P35251 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 KRT18P15-201ENST00000458108 1291 ntBASIC15.04■□□□□ -0
RFC1P35251 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC15.04■□□□□ -0
RFC1P35251 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.04■□□□□ -0
RFC1P35251 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.04■□□□□ -0
RFC1P35251 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.04■□□□□ -0
RFC1P35251 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.04■□□□□ -0
RFC1P35251 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.04■□□□□ -0
RFC1P35251 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.04■□□□□ -0
RFC1P35251 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.04■□□□□ -0
RFC1P35251 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.04■□□□□ -0
RFC1P35251 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.04■□□□□ -0
RFC1P35251 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 AL031595.1-201ENST00000623969 4709 ntBASIC15.04■□□□□ -0
RFC1P35251 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RFC1P35251 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms