Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.43□□□□□ -0.1
VCLP18206 AL590440.2-201ENST00000641973 1595 ntBASIC14.43□□□□□ -0.1
VCLP18206 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCLP18206 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 AC114271.1-201ENST00000612689 2813 ntBASIC14.42□□□□□ -0.1
VCLP18206 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 KHSRPP1-201ENST00000427983 1768 ntBASIC14.42□□□□□ -0.1
VCLP18206 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
VCLP18206 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.42□□□□□ -0.1
VCLP18206 RNMTL1P1-201ENST00000454103 560 ntBASIC14.42□□□□□ -0.1
VCLP18206 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.42□□□□□ -0.1
VCLP18206 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.42□□□□□ -0.1
VCLP18206 RBM8B-201ENST00000555532 525 ntBASIC14.42□□□□□ -0.1
VCLP18206 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 BNIP3P13-201ENST00000599968 566 ntBASIC14.42□□□□□ -0.1
VCLP18206 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.42□□□□□ -0.1
VCLP18206 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 AC004241.5-201ENST00000623870 2448 ntBASIC14.42□□□□□ -0.1
VCLP18206 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VCLP18206 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VCLP18206 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
VCLP18206 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
VCLP18206 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VCLP18206 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VCLP18206 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.41□□□□□ -0.1
VCLP18206 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 MIR1247-201ENST00000408206 136 ntBASIC14.41□□□□□ -0.1
VCLP18206 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.41□□□□□ -0.1
VCLP18206 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.41□□□□□ -0.1
VCLP18206 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VCLP18206 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.41□□□□□ -0.1
VCLP18206 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.41□□□□□ -0.1
VCLP18206 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 AC008805.1-201ENST00000590892 364 ntBASIC14.41□□□□□ -0.1
VCLP18206 AC138649.2-201ENST00000615886 705 ntBASIC14.41□□□□□ -0.1
VCLP18206 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.41□□□□□ -0.1
VCLP18206 AC004923.1-202ENST00000642106 209 ntBASIC14.41□□□□□ -0.1
VCLP18206 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VCLP18206 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.41□□□□□ -0.1
VCLP18206 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.41□□□□□ -0.1
VCLP18206 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 PEG13-201ENST00000631594 5667 ntBASIC14.41□□□□□ -0.1
VCLP18206 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.41□□□□□ -0.1
VCLP18206 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.41□□□□□ -0.1
VCLP18206 AC004899.1-201ENST00000424687 1714 ntBASIC14.41□□□□□ -0.1
VCLP18206 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VCLP18206 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VCLP18206 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.41□□□□□ -0.1
VCLP18206 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VCLP18206 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms