Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SPCS2P2-201ENST00000603270 608 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 AC090386.2-201ENST00000623010 1039 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 AC105206.1-202ENST00000314927 2368 ntBASIC15.65■□□□□ 0.1
ITGA4P13612 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.65■□□□□ 0.1
ITGA4P13612 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 AC130686.1-201ENST00000622936 2466 ntBASIC15.65■□□□□ 0.1
ITGA4P13612 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ITGA4P13612 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ITGA4P13612 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ITGA4P13612 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.65■□□□□ 0.1
ITGA4P13612 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 AC092580.1-201ENST00000433998 658 ntBASIC15.65■□□□□ 0.1
ITGA4P13612 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.65■□□□□ 0.1
ITGA4P13612 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.65■□□□□ 0.1
ITGA4P13612 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.65■□□□□ 0.1
ITGA4P13612 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
ITGA4P13612 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.65■□□□□ 0.1
ITGA4P13612 AC093752.3-201ENST00000567343 901 ntBASIC15.65■□□□□ 0.1
ITGA4P13612 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.65■□□□□ 0.1
ITGA4P13612 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.65■□□□□ 0.1
ITGA4P13612 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
ITGA4P13612 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
ITGA4P13612 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ITGA4P13612 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 AC005252.3-201ENST00000623855 2258 ntBASIC15.65■□□□□ 0.1
ITGA4P13612 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ITGA4P13612 LAP3P2-201ENST00000454686 1454 ntBASIC15.65■□□□□ 0.1
ITGA4P13612 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.65■□□□□ 0.1
ITGA4P13612 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
ITGA4P13612 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.64■□□□□ 0.09
ITGA4P13612 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.64■□□□□ 0.09
ITGA4P13612 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
ITGA4P13612 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.64■□□□□ 0.09
ITGA4P13612 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ITGA4P13612 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC15.64■□□□□ 0.09
ITGA4P13612 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ITGA4P13612 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ITGA4P13612 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.64■□□□□ 0.09
ITGA4P13612 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ITGA4P13612 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
ITGA4P13612 KRT17P5-201ENST00000332088 839 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms