Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.36□□□□□ -0.11
RETP07949 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RETP07949 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RETP07949 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.36□□□□□ -0.11
RETP07949 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RETP07949 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 AL672207.1-201ENST00000328462 1570 ntBASIC14.36□□□□□ -0.11
RETP07949 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RETP07949 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RETP07949 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.36□□□□□ -0.11
RETP07949 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.36□□□□□ -0.11
RETP07949 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.36□□□□□ -0.11
RETP07949 GNG10P1-201ENST00000452289 199 ntBASIC14.36□□□□□ -0.11
RETP07949 AC131206.1-201ENST00000538078 1211 ntBASIC14.36□□□□□ -0.11
RETP07949 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.36□□□□□ -0.11
RETP07949 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.36□□□□□ -0.11
RETP07949 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.36□□□□□ -0.11
RETP07949 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RETP07949 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.36□□□□□ -0.11
RETP07949 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.36□□□□□ -0.11
RETP07949 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RETP07949 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RETP07949 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.36□□□□□ -0.11
RETP07949 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.35□□□□□ -0.11
RETP07949 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RETP07949 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RETP07949 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RETP07949 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.35□□□□□ -0.11
RETP07949 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.35□□□□□ -0.11
RETP07949 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 AC015656.1-201ENST00000624209 3578 ntBASIC14.35□□□□□ -0.11
RETP07949 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RETP07949 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RETP07949 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.35□□□□□ -0.11
RETP07949 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RETP07949 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 MIR1301-201ENST00000408518 82 ntBASIC14.35□□□□□ -0.11
RETP07949 AC073869.2-201ENST00000417338 1026 ntBASIC14.35□□□□□ -0.11
RETP07949 ACTG1P19-201ENST00000418987 1116 ntBASIC14.35□□□□□ -0.11
RETP07949 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.35□□□□□ -0.11
RETP07949 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.35□□□□□ -0.11
RETP07949 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RETP07949 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.35□□□□□ -0.11
RETP07949 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.35□□□□□ -0.11
RETP07949 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RETP07949 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RETP07949 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.35□□□□□ -0.11
RETP07949 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms