Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
MT-ND1P03886 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.51□□□□□ -0.25
MT-ND1P03886 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.51□□□□□ -0.25
MT-ND1P03886 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
MT-ND1P03886 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 MIR661-201ENST00000384842 89 ntBASIC13.51□□□□□ -0.25
MT-ND1P03886 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
MT-ND1P03886 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
MT-ND1P03886 AC140912.1-201ENST00000577171 1054 ntBASIC13.51□□□□□ -0.25
MT-ND1P03886 RN7SL204P-201ENST00000582831 262 ntBASIC13.51□□□□□ -0.25
MT-ND1P03886 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.51□□□□□ -0.25
MT-ND1P03886 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
MT-ND1P03886 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 AL122018.1-201ENST00000446607 2310 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 FKBP4P6-201ENST00000457486 1332 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.5□□□□□ -0.25
MT-ND1P03886 PIN1P1-201ENST00000412108 996 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 PUDPP3-201ENST00000445368 636 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.5□□□□□ -0.25
MT-ND1P03886 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.5□□□□□ -0.25
MT-ND1P03886 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.5□□□□□ -0.25
MT-ND1P03886 AC027237.1-201ENST00000560942 655 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.5□□□□□ -0.25
MT-ND1P03886 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.5□□□□□ -0.25
MT-ND1P03886 AL096865.1-201ENST00000606796 927 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.5□□□□□ -0.25
MT-ND1P03886 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 AL355102.3-201ENST00000554299 1678 ntBASIC13.5□□□□□ -0.25
MT-ND1P03886 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MT-ND1P03886 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MT-ND1P03886 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.5□□□□□ -0.25
MT-ND1P03886 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms