Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-AP01891 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-AP01891 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.11□□□□□ -0.47
HLA-AP01891 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-AP01891 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
HLA-AP01891 MRPS18AP1-201ENST00000414458 589 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 AK2P2-201ENST00000439142 405 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.11□□□□□ -0.47
HLA-AP01891 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.11□□□□□ -0.47
HLA-AP01891 GCOM2-201ENST00000509133 1104 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.11□□□□□ -0.47
HLA-AP01891 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.11□□□□□ -0.47
HLA-AP01891 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 AC004840.1-201ENST00000636359 365 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 AL603764.1-201ENST00000636452 321 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 PRSS30P-206ENST00000641773 873 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-AP01891 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-AP01891 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 AC022497.1-201ENST00000624916 3691 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HLA-AP01891 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
HLA-AP01891 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 ABCD1P2-201ENST00000429313 1601 ntBASIC12.11□□□□□ -0.47
HLA-AP01891 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.11□□□□□ -0.47
HLA-AP01891 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HLA-AP01891 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HLA-AP01891 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 AC027369.3-201ENST00000530465 3707 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HLA-AP01891 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 AC026271.4-201ENST00000578214 1833 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.1□□□□□ -0.47
HLA-AP01891 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 AL589987.1-201ENST00000453380 819 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 AC026410.3-201ENST00000514280 936 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 RNA5SP421-201ENST00000516864 134 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.1□□□□□ -0.47
HLA-AP01891 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
HLA-AP01891 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
HLA-AP01891 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.1□□□□□ -0.47
HLA-AP01891 AC104794.3-201ENST00000566840 1248 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 AC138761.1-201ENST00000584393 385 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.1□□□□□ -0.47
HLA-AP01891 AL355385.1-201ENST00000606123 409 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 BX539320.1-201ENST00000623759 877 ntBASIC12.1□□□□□ -0.47
HLA-AP01891 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HLA-AP01891 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms