Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MST1L-204ENST00000545160 559 ntTSL 4 BASIC14.08□□□□□ -0.16
PDGFBP01127 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 RN7SL300P-201ENST00000582522 318 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC14.08□□□□□ -0.16
PDGFBP01127 AC087072.1-201ENST00000603727 421 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 MIR8071-1-201ENST00000616769 65 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 MIR8071-2-201ENST00000616772 65 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 AC138627.1-201ENST00000641127 1257 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
PDGFBP01127 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
PDGFBP01127 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PDGFBP01127 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.07□□□□□ -0.16
PDGFBP01127 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
PDGFBP01127 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 AC215219.1-201ENST00000400706 1817 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC14.07□□□□□ -0.16
PDGFBP01127 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC14.07□□□□□ -0.16
PDGFBP01127 AC093106.1-201ENST00000437271 352 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.07□□□□□ -0.16
PDGFBP01127 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 AC233724.9-201ENST00000511694 407 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC14.07□□□□□ -0.16
PDGFBP01127 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 TPST2P1-201ENST00000564073 1102 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 MIR4640-201ENST00000581824 90 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC14.07□□□□□ -0.16
PDGFBP01127 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 AC104506.1-201ENST00000609247 429 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 Z82244.2-201ENST00000632196 448 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 RPL4P6-201ENST00000438116 1304 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PDGFBP01127 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PDGFBP01127 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 AC103702.1-201ENST00000548801 2630 ntBASIC14.07□□□□□ -0.16
PDGFBP01127 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PDGFBP01127 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDGFBP01127 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.06□□□□□ -0.16
PDGFBP01127 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.06□□□□□ -0.16
PDGFBP01127 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PDGFBP01127 AC008620.2-201ENST00000510294 1569 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms