Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 AC022497.1-201ENST00000624916 3691 ntBASIC10.56□□□□□ -0.72
NACAE9PAV3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.56□□□□□ -0.72
NACAE9PAV3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC10.56□□□□□ -0.72
NACAE9PAV3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC10.56□□□□□ -0.72
NACAE9PAV3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
NACAE9PAV3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC10.56□□□□□ -0.72
NACAE9PAV3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.56□□□□□ -0.72
NACAE9PAV3 MIR6799-201ENST00000620297 69 ntBASIC10.56□□□□□ -0.72
NACAE9PAV3 AC138951.2-201ENST00000623455 1161 ntBASIC10.56□□□□□ -0.72
NACAE9PAV3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.56□□□□□ -0.72
NACAE9PAV3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
NACAE9PAV3 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.55□□□□□ -0.72
NACAE9PAV3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC10.55□□□□□ -0.72
NACAE9PAV3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 G2E3-212ENST00000553504 3796 ntTSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
NACAE9PAV3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.55□□□□□ -0.72
NACAE9PAV3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.55□□□□□ -0.72
NACAE9PAV3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AC114812.1-204ENST00000449669 728 ntBASIC10.55□□□□□ -0.72
NACAE9PAV3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC10.55□□□□□ -0.72
NACAE9PAV3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC10.55□□□□□ -0.72
NACAE9PAV3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 AC243960.2-201ENST00000600996 747 ntBASIC10.55□□□□□ -0.72
NACAE9PAV3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AC138466.3-201ENST00000619983 221 ntBASIC10.55□□□□□ -0.72
NACAE9PAV3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AC020910.5-201ENST00000623668 1865 ntBASIC10.55□□□□□ -0.72
NACAE9PAV3 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AC015688.4-201ENST00000580780 1647 ntBASIC10.55□□□□□ -0.72
NACAE9PAV3 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 MYADML-201ENST00000474610 2147 ntBASIC10.55□□□□□ -0.72
NACAE9PAV3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
NACAE9PAV3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC10.55□□□□□ -0.72
NACAE9PAV3 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
NACAE9PAV3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms