Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TMEM235A6NFC5 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 DLX4-206ENST00000611342 1662 ntBASIC12.23□□□□□ -0.45
TMEM235A6NFC5 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 POM121L14P-201ENST00000406100 1558 ntBASIC12.23□□□□□ -0.45
TMEM235A6NFC5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.23□□□□□ -0.45
TMEM235A6NFC5 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TMEM235A6NFC5 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AC024075.2-201ENST00000598112 1473 ntBASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.22□□□□□ -0.45
TMEM235A6NFC5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms