Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC187A0A096LP49 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCDC187A0A096LP49 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.45□□□□□ -0.26
CCDC187A0A096LP49 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC13.45□□□□□ -0.26
CCDC187A0A096LP49 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC13.45□□□□□ -0.26
CCDC187A0A096LP49 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AJ011931.1-201ENST00000618749 2492 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 VENTXP4-201ENST00000449029 958 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC026470.1-201ENST00000478038 846 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 ALG1L3P-201ENST00000503331 765 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 PRSS3P1-201ENST00000503996 742 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 TREHP1-201ENST00000531328 465 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 FOXN3-AS2-201ENST00000554071 1262 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC006548.2-201ENST00000605217 529 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AL009176.1-201ENST00000607876 650 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AP001527.2-201ENST00000614441 631 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC091769.1-201ENST00000619576 568 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AL109809.1-201ENST00000418979 1367 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.44□□□□□ -0.26
CCDC187A0A096LP49 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 OR2I1P-210ENST00000642037 4691 ntBASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 PDXDC2P-206ENST00000534700 1315 ntBASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 RPL13AP3-202ENST00000494676 1473 ntBASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCDC187A0A096LP49 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms