Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 FAM8A2P-201ENST00000528813 1142 ntBASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AC104982.3-201ENST00000581995 514 ntBASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AC136759.1-202ENST00000530858 2194 ntBASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB13Q9Y5F0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC144522.1-201ENST00000625111 1658 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC068587.2-201ENST00000478386 781 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AL160314.3-201ENST00000556041 767 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC005730.2-201ENST00000564549 1184 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC005962.1-201ENST00000584100 773 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC005324.6-201ENST00000587972 613 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC091271.1-201ENST00000611877 1162 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AL035425.4-201ENST00000624509 1063 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 CICP16-201ENST00000502609 2813 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 HSPA8P5-201ENST00000456928 2069 ntBASIC16.03■□□□□ 0.16
PCDHB13Q9Y5F0 NIFK-AS1-202ENST00000414554 1411 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDHB13Q9Y5F0 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms