Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 RPL17P45-201ENST00000586289 509 ntBASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AC104506.1-201ENST00000609247 429 ntBASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AC006372.4-201ENST00000624122 1543 ntBASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AL354861.1-201ENST00000445213 355 ntBASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AC023824.1-201ENST00000562945 2975 ntBASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 RN7SL665P-201ENST00000578793 300 ntBASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AL133467.4-201ENST00000602953 725 ntBASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AL021707.6-201ENST00000609212 491 ntBASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 AC073911.3-201ENST00000624401 631 ntBASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CTDP1Q9Y5B0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC011498.7-201ENST00000624986 2027 ntBASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 RN7SKP109-201ENST00000410592 316 ntBASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC092638.2-201ENST00000441105 947 ntBASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CTDP1Q9Y5B0 MIR4649-201ENST00000582839 64 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms