Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AL354702.1-201ENST00000442006 1960 ntBASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 RPL7P35-201ENST00000446943 740 ntBASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.15■□□□□ 0.18
HDAC6Q9UBN7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HDAC6Q9UBN7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.18
HDAC6Q9UBN7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.14■□□□□ 0.18
HDAC6Q9UBN7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
HDAC6Q9UBN7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AL359881.3-201ENST00000602640 1721 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 KRT8P31-201ENST00000504812 1408 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC097376.2-205ENST00000610159 5334 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AL627422.1-201ENST00000434104 580 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 DUX4L50-201ENST00000455245 715 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 TPT1P11-201ENST00000458482 498 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC130709.1-201ENST00000484779 1212 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 DNM1P30-201ENST00000563586 452 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 AC007326.1-201ENST00000604539 458 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 CICP8-201ENST00000455800 2813 ntBASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HDAC6Q9UBN7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms