Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 AP002803.1-201ENST00000528836 498 ntBASIC13.12□□□□□ -0.31
LRFN1Q9P244 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 AC138894.2-201ENST00000602838 371 ntBASIC13.12□□□□□ -0.31
LRFN1Q9P244 AC092171.5-201ENST00000608012 942 ntBASIC13.12□□□□□ -0.31
LRFN1Q9P244 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 MIR7845-201ENST00000618396 99 ntBASIC13.12□□□□□ -0.31
LRFN1Q9P244 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LRFN1Q9P244 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.12□□□□□ -0.31
LRFN1Q9P244 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 OR8T1P-201ENST00000421347 918 ntBASIC13.11□□□□□ -0.31
LRFN1Q9P244 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 AC253536.4-201ENST00000440539 267 ntBASIC13.11□□□□□ -0.31
LRFN1Q9P244 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 RN7SL81P-201ENST00000493781 261 ntBASIC13.11□□□□□ -0.31
LRFN1Q9P244 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 IQSEC3P1-201ENST00000538799 536 ntBASIC13.11□□□□□ -0.31
LRFN1Q9P244 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 AC242376.2-201ENST00000619355 883 ntBASIC13.11□□□□□ -0.31
LRFN1Q9P244 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 RN7SL832P-201ENST00000607781 1756 ntBASIC13.11□□□□□ -0.31
LRFN1Q9P244 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LRFN1Q9P244 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
LRFN1Q9P244 CICP24-201ENST00000605464 2705 ntBASIC13.11□□□□□ -0.31
LRFN1Q9P244 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms