Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UPF2Q9HAU5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 DFFBP1-201ENST00000433250 979 ntBASIC17.58■□□□□ 0.4
UPF2Q9HAU5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 AC093433.1-201ENST00000458048 571 ntBASIC17.58■□□□□ 0.4
UPF2Q9HAU5 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.58■□□□□ 0.4
UPF2Q9HAU5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 CU634019.7-201ENST00000624153 1185 ntBASIC17.58■□□□□ 0.4
UPF2Q9HAU5 FP236241.2-201ENST00000624906 1185 ntBASIC17.58■□□□□ 0.4
UPF2Q9HAU5 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 ABCD1P2-201ENST00000429313 1601 ntBASIC17.58■□□□□ 0.4
UPF2Q9HAU5 AL359845.1-201ENST00000458202 1648 ntBASIC17.58■□□□□ 0.4
UPF2Q9HAU5 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC17.58■□□□□ 0.4
UPF2Q9HAU5 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AL391825.1-201ENST00000457671 1364 ntBASIC17.57■□□□□ 0.4
UPF2Q9HAU5 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AL355102.3-201ENST00000554299 1678 ntBASIC17.57■□□□□ 0.4
UPF2Q9HAU5 DLX4-206ENST00000611342 1662 ntBASIC17.57■□□□□ 0.4
UPF2Q9HAU5 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UPF2Q9HAU5 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UPF2Q9HAU5 CARS-214ENST00000529772 2637 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms